KEGGaNOG
Code & full README
Usage Guide
Motivation
eggNOG-mapper
is a beautiful tool for fast functional annotation of novel sequences. Yet it does not provide any visualization functions.KEGG-Decoder
is a perfect tool for visualizing KEGG Pathways. But it takes only KEGG-Koala outputs (including blastKOALA, ghostKOALA, KOFAMSCAN).KEGG-Koala
is a web-tool which can work for more than 24 hours.eggNOG-mapper
can be installed locally on your PC / server and work faster.- This tool
KEGGaNOG
makeseggNOG-mapper
meetKEGG-Decoder
! It parseseggNOG-mapper
output, make it fit for the input toKEGG-Decoder
and then visualize KEGG Pathways as the heatmap! - Pro-tip:
eggNOG-mapper
andKEGGaNOG
could be wrapped into 🐍Snakemake
pipeline making metabolic profiling a “one-click” process!